<?xml version="1.0" encoding="utf-8"?>
<journal>
<title>Iranian Biomedical Journal</title>
<title_fa>مجله بیومدیکال ایران</title_fa>
<short_title>IBJ</short_title>
<subject>Basic Sciences</subject>
<web_url>http://ibj.pasteur.ac.ir</web_url>
<journal_hbi_system_id>1</journal_hbi_system_id>
<journal_hbi_system_user>admin</journal_hbi_system_user>
<journal_id_issn>1028-852X</journal_id_issn>
<journal_id_issn_online>2008-823X</journal_id_issn_online>
<journal_id_pii>-</journal_id_pii>
<journal_id_doi>10.61882/ibj</journal_id_doi>
<journal_id_iranmedex></journal_id_iranmedex>
<journal_id_magiran></journal_id_magiran>
<journal_id_sid>-</journal_id_sid>
<journal_id_nlai>8888</journal_id_nlai>
<journal_id_science>-</journal_id_science>
<language>en</language>
<pubdate>
	<type>jalali</type>
	<year>1401</year>
	<month>4</month>
	<day>1</day>
</pubdate>
<pubdate>
	<type>gregorian</type>
	<year>2022</year>
	<month>7</month>
	<day>1</day>
</pubdate>
<volume>26</volume>
<number>4</number>
<publish_type>online</publish_type>
<publish_edition>1</publish_edition>
<article_type>fulltext</article_type>
<articleset>
	<article>


	<language>en</language>
	<article_id_doi></article_id_doi>
	<title_fa></title_fa>
	<title>Packaging, Purification, and Titration of  Replication-Deficient Semliki Forest Virus-Derived  Particles as a Self-Amplifying mRNA Vaccine Vector</title>
	<subject_fa>Molecular Microbiology</subject_fa>
	<subject>Molecular Microbiology</subject>
	<content_type_fa>مقاله کامل</content_type_fa>
	<content_type>Full Length/Original Article</content_type>
	<abstract_fa></abstract_fa>
	<abstract>&lt;div style=&quot;text-align: justify;&quot;&gt;&lt;span style=&quot;font-family:Times New Roman;&quot;&gt;&lt;span style=&quot;font-size:11pt&quot;&gt;&lt;span style=&quot;line-height:normal&quot;&gt;&lt;span calibri=&quot;&quot;&gt;&lt;b&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;Background:&lt;/span&gt;&lt;/b&gt; &lt;span style=&quot;font-size:10.5pt&quot;&gt;Self-amplifying mRNA is the next-generation vaccine platform with the potential advantages in efficacy and speed of development against infectious diseases and cancer. The main aim was to present optimized and rapid methods for Semliki Forest virus (SFV)-PD self-amplifying mRNA (SAM) preparation, its packaging, and titer determination. These protocols are provided for producing and harvesting the high yields of virus replicon particle (VRP)-packaged SAM for vaccine studies.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;br&gt;
&lt;span style=&quot;font-size:11pt&quot;&gt;&lt;span style=&quot;line-height:normal&quot;&gt;&lt;span calibri=&quot;&quot;&gt;&lt;b&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;Methods:&lt;/span&gt;&lt;/b&gt; &lt;span style=&quot;font-size:10.5pt&quot;&gt;pSFV-PD-EGFP plasmid was linearized and subjected to &lt;i&gt;in vitro &lt;/i&gt;transcription&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;. Different concentrations of SFV-PD SAM were first transfected into &lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;&lt;span style=&quot;color:black&quot;&gt;human embryonic kidney&amp;nbsp;293 cells&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt; (HEK-293) and &lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;&lt;span style=&quot;color:black&quot;&gt;baby hamster kidney cell line 21 (&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;BHK-21) cell lines, and EGFP expression at different time points was evaluated by fluorescent microscopy. Replicon particle packaging was achieved by co-transfection of SFV-PD SAM and pSFV-Helper2 RNA into BHK-21 cells. The VRPs were concentrated using&lt;/span&gt; &lt;span style=&quot;font-size:10.5pt&quot;&gt;ultrafiltration&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt; with &lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;100 kDa cut-off&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;. The titers of replicon particles were determined by reverse transcription quantitative real-time PCR (RT-qPCR).&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;br&gt;
&lt;span style=&quot;font-size:11pt&quot;&gt;&lt;span style=&quot;line-height:normal&quot;&gt;&lt;span calibri=&quot;&quot;&gt;&lt;b&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;Results:&lt;/span&gt;&lt;/b&gt; &lt;i&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;In vitro&lt;/span&gt;&lt;/i&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt; transcribed SAM encoding EGFP was successfully transfected and expressed in HEK-293 and BHK-21 cell lines. Higher levels of EGFP expression was observed in BHK-21 compared to HEK-293 cells showing more stable protein overexpression and VRP packaging.&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt; Using ultrafiltration&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;, the high&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt; yields of purified SFV-PD-EGFP particles were rapidly obtained with only minor loss of replicon particles. Accurate and rapid titer determination of replication-deficient particles was achieved by &lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;RT-qPCR&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;br&gt;
&lt;b&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;&lt;span style=&quot;line-height:115%&quot;&gt;&lt;span calibri=&quot;&quot;&gt;Conclusion:&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/b&gt; &lt;span style=&quot;font-size:10.5pt&quot;&gt;&lt;span style=&quot;line-height:115%&quot;&gt;&lt;span calibri=&quot;&quot;&gt;Using optimized methods for SAM transfection, VRP packaging, and concentration, high yields of SFV-PD VRPs could be produced and purified. The &lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;&lt;span style=&quot;line-height:115%&quot;&gt;&lt;span calibri=&quot;&quot;&gt;RT-qPCR&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;span style=&quot;font-size:10.5pt&quot;&gt;&lt;span style=&quot;line-height:115%&quot;&gt;&lt;span calibri=&quot;&quot;&gt; demonstrated to be an accurate and rapid method for titer determination of replication deficient VRPs.&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/span&gt;&lt;/div&gt;</abstract>
	<keyword_fa></keyword_fa>
	<keyword>mRNA vaccines, Semliki Forest virus, Vaccines</keyword>
	<start_page>269</start_page>
	<end_page>278</end_page>
	<web_url>http://ibj.pasteur.ac.ir/browse.php?a_code=A-10-4670-1&amp;slc_lang=en&amp;sid=1</web_url>


<author_list>
	<author>
	<first_name>Nastaran Sadat</first_name>
	<middle_name></middle_name>
	<last_name>Savar</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>nstrn.savar@gmail.com</email>
	<code></code>
	<orcid>0000-0003-2509-2127</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Immunology Department, Pasteur Institute of Iran, Tehran, Iran</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Thomas</first_name>
	<middle_name></middle_name>
	<last_name>Vallet</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>thomas.vallet@pasteur.fr</email>
	<code></code>
	<orcid>0000-0001-7775-7448</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Institut Pasteur, Viral Populations  and Pathogenesis Unit, Centre National de la Recherche Scientifique UMR 3569, Paris, France</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Arash</first_name>
	<middle_name></middle_name>
	<last_name>Arashkia</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>arash.arashkia@gmail.com</email>
	<code></code>
	<orcid>0000-0002-3117-3217</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Virology Department, Pasteur Institute of Iran, Tehran, Iran; 4PanTherapeutics, CH 1095 Lutry, Switzerland</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Kenneth</first_name>
	<middle_name></middle_name>
	<last_name>Lundstrom</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>lundstromkenneth@gmail.com</email>
	<code></code>
	<orcid>0000-0002-0580-5209</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>PanTherapeutics, CH 1095 Lutry, Switzerland</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Marco</first_name>
	<middle_name></middle_name>
	<last_name>Vignuzzi*</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>marco.vignuzzi@pasteur.fr</email>
	<code></code>
	<orcid>0000-0002-4400-771X</orcid>
	<coreauthor>No</coreauthor>
	<affiliation>Institut Pasteur, Viral Populations  and Pathogenesis Unit, Centre National de la Recherche Scientifique UMR 3569, Paris, France</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


	<author>
	<first_name>Hamid</first_name>
	<middle_name></middle_name>
	<last_name>Mahmoudzadeh Niknam</last_name>
	<suffix></suffix>
	<first_name_fa></first_name_fa>
	<middle_name_fa></middle_name_fa>
	<last_name_fa></last_name_fa>
	<suffix_fa></suffix_fa>
	<email>hamid.m.niknam@gmail.com</email>
	<code></code>
	<orcid>0000-0001-9338-4266</orcid>
	<coreauthor>Yes
</coreauthor>
	<affiliation>Immunology Department, Pasteur Institute of Iran, Tehran, Iran</affiliation>
	<affiliation_fa></affiliation_fa>
	 </author>


</author_list>


	</article>
</articleset>
</journal>
